U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102595127 galacturonosyltransferase 8 [ Solanum tuberosum (potato) ]

Gene ID: 102595127, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102595127
Gene description
galacturonosyltransferase 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102595127 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239073.1 (214677..218226, complement)

NW_006239073.1Genomic Context describing neighboring genes Neighboring gene ninja-family protein AFP3-like Neighboring gene putative G3BP-like protein Neighboring gene wound-induced basic protein Neighboring gene transcriptional activator FHA1-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006239073.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables polygalacturonate 4-alpha-galacturonosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galacturonosyltransferase 8

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239073.1 Reference SolTub_3.0 Primary Assembly

    Range
    214677..218226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006352620.2 → XP_006352682.1  galacturonosyltransferase 8

    UniProtKB/TrEMBL
    M1BS80
    Conserved Domains (1) summary
    PLN02523
    Location:3 → 557
    PLN02523; galacturonosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases