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LOC102594858 pectinesterase QRT1-like [ Solanum tuberosum (potato) ]

Gene ID: 102594858, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102594858
Gene description
pectinesterase QRT1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102594858 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239000.1 (1366720..1369814, complement)

NW_006239000.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102589315 Neighboring gene pectinesterase QRT1-like Neighboring gene serine acetyltransferase 1, chloroplastic Neighboring gene germin-like protein 11-1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239000.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables pectinesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell wall modification IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
pectinesterase QRT1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239000.1 Reference SolTub_3.0 Primary Assembly

    Range
    1366720..1369814 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006346190.1 → XP_006346252.1  pectinesterase QRT1-like

    UniProtKB/TrEMBL
    M1C0Z2
    Conserved Domains (2) summary
    PLN02432
    Location:6 → 321
    PLN02432; putative pectinesterase
    cl01911
    Location:19 → 322
    Pectinesterase; Pectinesterase
Nucleotide Protein
Heading Accession and Version

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