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LOC102594653 beta-(1,2)-xylosyltransferase-like [ Solanum tuberosum (potato) ]

Gene ID: 102594653, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102594653
Gene description
beta-(1,2)-xylosyltransferase-like
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
Also known as
xt1
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Genomic context

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See LOC102594653 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239000.1 (1489070..1492899)

NW_006239000.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S8-like Neighboring gene pirin-like protein At1g50590 Neighboring gene putative MO25-like protein At5g47540 Neighboring gene glycerophosphodiester phosphodiesterase GDPDL4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239000.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-(1,2)-xylosyltransferase-like
Names
Beta-1,2-xylosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001288099.1 → NP_001275028.1  beta-(1,2)-xylosyltransferase-like precursor

    Status: PROVISIONAL

    Source sequence(s)
    AM179855
    UniProtKB/TrEMBL
    M1C0G7, Q2UVB5
    Conserved Domains (1) summary
    pfam04577
    Location:248 → 501
    DUF563; Protein of unknown function (DUF563)

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239000.1 Reference SolTub_3.0 Primary Assembly

    Range
    1489070..1492899
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases