U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102593702 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like [ Solanum tuberosum (potato) ]

Gene ID: 102593702, updated on 2-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC102593702
Gene description
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC102593702 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239109.1 (565186..569720, complement)

NW_006239109.1Genomic Context describing neighboring genes Neighboring gene protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like Neighboring gene UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 Neighboring gene protein TIC 22, chloroplastic Neighboring gene UDP-glycosyltransferase 79B6-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_006239109.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in xylan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239109.1 Reference SolTub_3.0 Primary Assembly

    Range
    565186..569720 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006354890.2 → XP_006354952.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X1

    UniProtKB/TrEMBL
    M1ADX9
    Conserved Domains (1) summary
    cd02537
    Location:289 → 533
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen

  2. XM_015312071.1 → XP_015167557.1  UDP-glucuronate:xylan alpha-glucuronosyltransferase 2-like isoform X2

    Conserved Domains (1) summary
    cd02537
    Location:226 → 470
    GT8_Glycogenin; Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases