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LOC102585097 sterol 3-beta-glucosyltransferase UGT80B1 [ Solanum tuberosum (potato) ]

Gene ID: 102585097, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102585097
Gene description
sterol 3-beta-glucosyltransferase UGT80B1
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102585097 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006239231.1 (29989..46309, complement)

NW_006239231.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like protein slr0233 Neighboring gene uncharacterized LOC102584785 Neighboring gene UPF0496 protein At3g49070-like Neighboring gene probable mediator of RNA polymerase II transcription subunit 26c

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006239231.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol 3-beta-glucosyltransferase UGT80B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006239231.1 Reference SolTub_3.0 Primary Assembly

    Range
    29989..46309 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015314568.1 → XP_015170054.1  sterol 3-beta-glucosyltransferase UGT80B1 isoform X1

    Conserved Domains (2) summary
    cd03784
    Location:186 → 601
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:186 → 605
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]

  2. XM_015314567.1 → XP_015170053.1  sterol 3-beta-glucosyltransferase UGT80B1 isoform X1

    Conserved Domains (2) summary
    cd03784
    Location:186 → 601
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:186 → 605
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]

  3. XM_015314570.1 → XP_015170056.1  sterol 3-beta-glucosyltransferase UGT80B1 isoform X2

    Conserved Domains (2) summary
    cd03784
    Location:160 → 575
    GT1_Gtf_like; This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the ...
    COG1819
    Location:160 → 579
    YjiC; UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism]
Nucleotide Protein
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