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LOC102580118 digalactosyldiacylglycerol synthase 2, chloroplastic [ Solanum tuberosum (potato) ]

Gene ID: 102580118, updated on 2-Nov-2023

Summary

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Gene symbol
LOC102580118
Gene description
digalactosyldiacylglycerol synthase 2, chloroplastic
Gene type
protein coding
RefSeq status
MODEL
Organism
Solanum tuberosum
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
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Genomic context

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See LOC102580118 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current SolTub_3.0 (GCF_000226075.1) Unplaced Scaffold NW_006238936.1 (1755052..1760503, complement)

NW_006238936.1Genomic Context describing neighboring genes Neighboring gene cytochrome P450 704C1-like Neighboring gene spastin Neighboring gene uncharacterized LOC102580897 Neighboring gene methionine adenosyltransferase 2 subunit beta

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006238936.1 Unplaced Scaffold Reference SolTub_3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables digalactosyldiacylglycerol synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chloroplast outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
digalactosyldiacylglycerol synthase 2, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Solanum tuberosum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference SolTub_3.0 Primary Assembly

Genomic

  1. NW_006238936.1 Reference SolTub_3.0 Primary Assembly

    Range
    1755052..1760503 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006339462.2 → XP_006339524.1  digalactosyldiacylglycerol synthase 2, chloroplastic

    See identical proteins and their annotated locations for XP_006339524.1

    UniProtKB/TrEMBL
    M0ZGQ5, M0ZGQ8
    Conserved Domains (1) summary
    cl10013
    Location:1 → 450
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  2. XM_006339463.2 → XP_006339525.1  digalactosyldiacylglycerol synthase 2, chloroplastic

    See identical proteins and their annotated locations for XP_006339525.1

    UniProtKB/TrEMBL
    M0ZGQ5, M0ZGQ8
    Conserved Domains (1) summary
    cl10013
    Location:1 → 450
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology

  3. XM_006339464.2 → XP_006339526.1  digalactosyldiacylglycerol synthase 2, chloroplastic

    See identical proteins and their annotated locations for XP_006339526.1

    UniProtKB/TrEMBL
    M0ZGQ5, M0ZGQ8
    Conserved Domains (1) summary
    cl10013
    Location:1 → 450
    Glycosyltransferase_GTB-type; glycosyltransferase family 1 and related proteins with GTB topology
Nucleotide Protein
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