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ACADM acyl-CoA dehydrogenase medium chain [ Alligator mississippiensis (American alligator) ]

Gene ID: 102576335, updated on 6-Jun-2024

Summary

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Gene symbol
ACADM
Gene description
acyl-CoA dehydrogenase medium chain
Locus tag
Y1Q_0020873
See related
EnsemblRapid:ENSAMIG00015013446
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ACADM in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (22487854..22510311)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710321.1 (6655424..6690428, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene LIM homeobox 8 Neighboring gene solute carrier family 44 member 5 Neighboring gene uncharacterized LOC132250750 Neighboring gene small nucleolar RNA SNORD45 Neighboring gene small nucleolar RNA SNORD45 Neighboring gene Rab geranylgeranyltransferase subunit beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables medium-chain fatty acyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in medium-chain fatty acid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
medium-chain specific acyl-CoA dehydrogenase, mitochondrial
Names
acyl-CoA dehydrogenase, C-4 to C-12 straight chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    22487854..22510311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727952.1 → XP_059583935.1  medium-chain specific acyl-CoA dehydrogenase, mitochondrial

    UniProtKB/TrEMBL
    A0A151NJH8
    Related
    ENSAMIP00015017434.1, ENSAMIT00015025065.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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