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PIGS phosphatidylinositol glycan anchor biosynthesis class S [ Alligator mississippiensis (American alligator) ]

Gene ID: 102575933, updated on 8-May-2024

Summary

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Gene symbol
PIGS
Gene description
phosphatidylinositol glycan anchor biosynthesis class S
Locus tag
Y1Q_0006766
See related
EnsemblRapid:ENSAMIG00015002042
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PIGS in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (1023753..1029272, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709242.1 (96..4574)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene forkhead box N1 Neighboring gene unc-119 lipid binding chaperone Neighboring gene aldolase, fructose-bisphosphate C Neighboring gene sperm associated antigen 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of GPI anchor to protein IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GPI-anchor transamidase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI transamidase component PIG-S

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    1023753..1029272 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059717329.1 → XP_059573312.1  GPI transamidase component PIG-S

    Related
    ENSAMIP00015002599.1, ENSAMIT00015003530.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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