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ITPK1 inositol-tetrakisphosphate 1-kinase [ Alligator mississippiensis (American alligator) ]

Gene ID: 102575334, updated on 18-Sep-2024

Summary

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Gene symbol
ITPK1
Gene description
inositol-tetrakisphosphate 1-kinase
Locus tag
Y1Q_0015145
See related
EnsemblRapid:ENSAMIG00015003499
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ITPK1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (276111861..276341909, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707977.1 (10505758..10728370)

Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109281686 Neighboring gene chromogranin A Neighboring gene uncharacterized LOC132248816 Neighboring gene lysosomal enzyme trafficking factor Neighboring gene GON7 subunit of KEOPS complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,3,4-trisphosphate 5-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,3,4-trisphosphate 6-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-3,4,5,6-tetrakisphosphate 1-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol trisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-tetrakisphosphate 1-kinase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081825.1 Reference rAllMis1 Primary Assembly

    Range
    276111861..276341909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059723183.1 → XP_059579166.1  inositol-tetrakisphosphate 1-kinase isoform X1

  2. XM_014596432.3 → XP_014451918.1  inositol-tetrakisphosphate 1-kinase isoform X2

    UniProtKB/TrEMBL
    A0A151P8S7
    Related
    ENSAMIP00015004392.1, ENSAMIT00015006401.1
    Conserved Domains (1) summary
    cl17255
    Location:1 → 315
    ATP-grasp_4; ATP-grasp domain
Nucleotide Protein
Heading Accession and Version

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