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NTM neurotrimin [ Alligator mississippiensis (American alligator) ]

Gene ID: 102574006, updated on 8-May-2024

Summary

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Gene symbol
NTM
Gene description
neurotrimin
Locus tag
Y1Q_0022564
See related
EnsemblRapid:ENSAMIG00015000785
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
NTM-1
Orthologs
human mouse all
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Genomic context

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See NTM in Genome Data Viewer
Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 16 NC_081839.1 (26184295..26919589)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709809.1 (1151664..1328476)

Chromosome 16 - NC_081839.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132246582 Neighboring gene uncharacterized LOC132246574 Neighboring gene opioid-binding protein/cell adhesion molecule Neighboring gene uncharacterized LOC132246581 Neighboring gene uncharacterized LOC132246512

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neurotrimin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081839.1 Reference rAllMis1 Primary Assembly

    Range
    26184295..26919589
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059719464.1 → XP_059575447.1  neurotrimin isoform X1

    Related
    ENSAMIP00015000546.1, ENSAMIT00015001102.1

  2. XM_059719465.1 → XP_059575448.1  neurotrimin isoform X2

  3. XM_059719466.1 → XP_059575449.1  neurotrimin isoform X3

  4. XM_059719468.1 → XP_059575451.1  neurotrimin isoform X5

  5. XM_059719469.1 → XP_059575452.1  neurotrimin isoform X6

  6. XM_059719467.1 → XP_059575450.1  neurotrimin isoform X4

    Related
    ENSAMIP00015000550.1, ENSAMIT00015001106.1

  7. XM_059719470.1 → XP_059575453.1  neurotrimin isoform X7

  8. XM_059719471.1 → XP_059575454.1  neurotrimin isoform X8

    Related
    ENSAMIP00015000532.1, ENSAMIT00015001088.1

  9. XM_059719472.1 → XP_059575455.1  neurotrimin isoform X9

Nucleotide Protein
Heading Accession and Version

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