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POFUT2 protein O-fucosyltransferase 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102573204, updated on 8-May-2024

Summary

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Gene symbol
POFUT2
Gene description
protein O-fucosyltransferase 2
Locus tag
Y1Q_0008740
See related
EnsemblRapid:ENSAMIG00015006793
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See POFUT2 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (187494834..187522126)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711096.1 (16871690..16894302)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene minichromosome maintenance complex component 3 associated protein Neighboring gene ybeY metalloendoribonuclease Neighboring gene uncharacterized LOC132249895 Neighboring gene adenosine deaminase RNA specific B1 Neighboring gene uncharacterized LOC132250086

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables peptide-O-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDP-fucose protein O-fucosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    187494834..187522126
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727189.1 → XP_059583172.1  GDP-fucose protein O-fucosyltransferase 2

  2. XM_019491979.2 → XP_019347524.2  GDP-fucose protein O-fucosyltransferase 2

    Related
    ENSAMIP00015008591.1, ENSAMIT00015012357.1
Nucleotide Protein
Heading Accession and Version

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