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AGPAT4 1-acylglycerol-3-phosphate O-acyltransferase 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102572816, updated on 6-Jun-2024

Summary

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Gene symbol
AGPAT4
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 4
Locus tag
Y1Q_0009131
See related
EnsemblRapid:ENSAMIG00015019462
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (138507965..138637093, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714194.1 (5507525..5633298, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109281211 Neighboring gene uncharacterized LOC132243987 Neighboring gene mitogen-activated protein kinase kinase kinase 4 Neighboring gene parkin RBR E3 ubiquitin protein ligase Neighboring gene uncharacterized LOC132243995 Neighboring gene uncharacterized LOC132243993

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase delta
Names
1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    138507965..138637093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059714734.1 → XP_059570717.1  1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform X3

  2. XM_006275802.4 → XP_006275864.1  1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform X1

    UniProtKB/TrEMBL
    A0A151M2D7
    Related
    ENSAMIP00015026614.1, ENSAMIT00015036970.1
    Conserved Domains (3) summary
    cd07990
    Location:62 → 256
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    PLN02380
    Location:20 → 315
    PLN02380; 1-acyl-sn-glycerol-3-phosphate acyltransferase
    pfam16076
    Location:243 → 314
    Acyltransf_C; Acyltransferase C-terminus

  3. XM_019479792.2 → XP_019335337.1  1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform X1

    UniProtKB/TrEMBL
    A0A151M2D7

  4. XM_059714733.1 → XP_059570716.1  1-acyl-sn-glycerol-3-phosphate acyltransferase delta isoform X2

    UniProtKB/TrEMBL
    A0A151M2D7
    Related
    ENSAMIP00015026605.1, ENSAMIT00015036959.1
Nucleotide Protein
Heading Accession and Version

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