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SGCG sarcoglycan gamma [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571920, updated on 6-Jun-2024

Summary

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Gene symbol
SGCG
Gene description
sarcoglycan gamma
Locus tag
Y1Q_0022950
See related
EnsemblRapid:ENSAMIG00015012395
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See SGCG in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (431378456..431674895, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708054.1 (281556..555920, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132247693 Neighboring gene sacsin molecular chaperone Neighboring gene RNA-directed DNA polymerase from mobile element jockey Neighboring gene uncharacterized LOC132250248

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    431378456..431674895 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019481962.2 → XP_019337507.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A151P716

  2. XM_019481960.2 → XP_019337505.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A151P716

  3. XM_059720488.1 → XP_059576471.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A151P716

  4. XM_059720479.1 → XP_059576462.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A151P716

  5. XM_019481961.2 → XP_019337506.1  gamma-sarcoglycan isoform X2

    UniProtKB/TrEMBL
    A0A151P716
    Related
    ENSAMIP00015015936.1, ENSAMIT00015022890.1

  6. XM_059720482.1 → XP_059576465.1  gamma-sarcoglycan isoform X1

    UniProtKB/TrEMBL
    A0A151P716
    Related
    ENSAMIP00015015941.1, ENSAMIT00015022895.1
Nucleotide Protein
Heading Accession and Version

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