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GPAM glycerol-3-phosphate acyltransferase, mitochondrial [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571532, updated on 8-May-2024

Summary

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Gene symbol
GPAM
Gene description
glycerol-3-phosphate acyltransferase, mitochondrial
Locus tag
Y1Q_0009586
See related
EnsemblRapid:ENSAMIG00015016275
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See GPAM in Genome Data Viewer
Location:
chromosome: 6
Exon count:
21
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 6 NC_081829.1 (93759385..93798054)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709336.1 (8750173..8789114)

Chromosome 6 - NC_081829.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109282823 Neighboring gene tectorin beta Neighboring gene uncharacterized LOC132251104 Neighboring gene transfer RNA histidin (anticodon GUG)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phospholipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate acyltransferase 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081829.1 Reference rAllMis1 Primary Assembly

    Range
    93759385..93798054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014594667.3 → XP_014450153.1  glycerol-3-phosphate acyltransferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A151NVF7
    Related
    ENSAMIP00015021638.1, ENSAMIT00015030694.1
    Conserved Domains (2) summary
    cd07993
    Location:202 → 412
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    COG2937
    Location:127 → 685
    PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]

  2. XM_006277962.4 → XP_006278024.1  glycerol-3-phosphate acyltransferase 1, mitochondrial

    UniProtKB/TrEMBL
    A0A151NVF7
    Related
    ENSAMIP00015021649.1, ENSAMIT00015030706.1
    Conserved Domains (2) summary
    cd07993
    Location:202 → 412
    LPLAT_DHAPAT-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: GPAT-like
    COG2937
    Location:127 → 685
    PlsB; Glycerol-3-phosphate O-acyltransferase [Lipid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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