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MASP1 MBL associated serine protease 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571302, updated on 8-May-2024

Summary

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Gene symbol
MASP1
Gene description
MBL associated serine protease 1
Locus tag
Y1Q_0013750
See related
EnsemblRapid:ENSAMIG00015010868
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
MASP1L; MASP1-1
Orthologs
human mouse all
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Genomic context

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See MASP1 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 7 NC_081830.1 (86012260..86064349, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713138.1 (125014..177093, complement)

Chromosome 7 - NC_081830.1Genomic Context describing neighboring genes Neighboring gene receptor-transporting protein 3-like Neighboring gene receptor-transporting protein 3 Neighboring gene cytoskeleton-associated protein 5-like Neighboring gene somatostatin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables serine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in complement activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in zymogen activation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in blood microparticle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannan-binding lectin serine protease 1
Names
mannan binding lectin serine peptidase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081830.1 Reference rAllMis1 Primary Assembly

    Range
    86012260..86064349 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014607105.3 → XP_014462591.2  mannan-binding lectin serine protease 1 isoform X2

    Related
    ENSAMIP00015013747.1, ENSAMIT00015019887.1

  2. XM_059731259.1 → XP_059587242.1  mannan-binding lectin serine protease 1 isoform X3

    Related
    ENSAMIP00015013746.1, ENSAMIT00015019886.1

  3. XM_014607104.3 → XP_014462590.2  mannan-binding lectin serine protease 1 isoform X1

    Related
    ENSAMIP00015013744.1, ENSAMIT00015019884.1

  4. XM_014607108.3 → XP_014462594.2  mannan-binding lectin serine protease 1 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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