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LMAN2L lectin, mannose binding 2 like [ Alligator mississippiensis (American alligator) ]

Gene ID: 102571100, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Locus tag
Y1Q_0004391
See related
EnsemblRapid:ENSAMIG00015022772
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 7 NC_081830.1 (10493323..10498451)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709393.1 (1792..6924)

Chromosome 7 - NC_081830.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain-containing protein 39-like Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene fer-1 like family member 5 Neighboring gene small serum protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081830.1 Reference rAllMis1 Primary Assembly

    Range
    10493323..10498451
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019486201.2 → XP_019341746.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A151NTU3

  2. XM_006274999.4 → XP_006275061.2  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A151NTU3
    Related
    ENSAMIP00015031430.1, ENSAMIT00015043229.1
Nucleotide Protein
Heading Accession and Version

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