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AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102570924, updated on 8-May-2024

Summary

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Gene symbol
AGPAT1
Gene description
1-acylglycerol-3-phosphate O-acyltransferase 1
Locus tag
Y1Q_0020331
See related
EnsemblRapid:ENSAMIG00015008020
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See AGPAT1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 11 NC_081834.1 (62666168..62675626)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017712591.1 (1555..8921)

Chromosome 11 - NC_081834.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132244196 Neighboring gene ring finger protein 5 Neighboring gene uncharacterized LOC132244197 Neighboring gene complement C4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerol-3-phosphate O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidic acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081834.1 Reference rAllMis1 Primary Assembly

    Range
    62666168..62675626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019497388.2 → XP_019352933.2  1-acyl-sn-glycerol-3-phosphate acyltransferase alpha

    Related
    ENSAMIP00015009901.1, ENSAMIT00015014360.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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