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ACOT12 acyl-CoA thioesterase 12 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102570778, updated on 8-May-2024

Summary

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Gene symbol
ACOT12
Gene description
acyl-CoA thioesterase 12
Locus tag
Y1Q_0004048
See related
EnsemblRapid:ENSAMIG00015022785
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ACOT12 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (250150990..250198309)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707593.1 (7886466..7932817, complement)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene autophagy related 10 Neighboring gene single stranded DNA binding protein 2 Neighboring gene zinc finger CCHC-type containing 9 Neighboring gene creatine kinase, mitochondrial 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetyl-CoA hydrolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acetyl-coenzyme A thioesterase
Names
acyl-coenzyme A thioesterase 12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    250150990..250198309
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019482972.2 → XP_019338517.2  acetyl-coenzyme A thioesterase isoform X2

  2. XM_014595425.3 → XP_014450911.2  acetyl-coenzyme A thioesterase isoform X1

    Related
    ENSAMIP00015031455.1, ENSAMIT00015043263.1

RNA

  1. XR_002088979.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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