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PLA2G1B phospholipase A2 group IB [ Alligator mississippiensis (American alligator) ]

Gene ID: 102570192, updated on 18-Sep-2024

Summary

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Gene symbol
PLA2G1B
Gene description
phospholipase A2 group IB
Locus tag
Y1Q_0022795
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PLA2G1B in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 10 NC_081833.1 (21096034..21103611)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711467.1 (2848127..2855805)

Chromosome 10 - NC_081833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132243549 Neighboring gene musashi RNA binding protein 1 Neighboring gene uncharacterized LOC132243550 Neighboring gene hydroxysteroid 11-beta-dehydrogenase 1-like protein B Neighboring gene hydroxysteroid 11-beta-dehydrogenase 1-like protein A Neighboring gene sirtuin 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipase A2 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables signaling receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in arachidonate secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phospholipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of fibroblast proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phospholipase A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081833.1 Reference rAllMis1 Primary Assembly

    Range
    21096034..21103611
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059713544.1 → XP_059569527.1  phospholipase A2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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