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TPI1 triosephosphate isomerase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102569489, updated on 8-May-2024

Summary

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Gene symbol
TPI1
Gene description
triosephosphate isomerase 1
Locus tag
Y1Q_0002915
See related
EnsemblRapid:ENSAMIG00015016786
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See TPI1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (244008032..244013248)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713645.1 (2509201..2514569)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene cell division cycle associated 3 Neighboring gene ubiquitin specific peptidase 5 Neighboring gene leucine rich repeat containing 23 Neighboring gene enolase 2 Neighboring gene uncharacterized LOC109280369

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables triose-phosphate isomerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glyceraldehyde-3-phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
triosephosphate isomerase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    244008032..244013248
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006273393.4 → XP_006273455.1  triosephosphate isomerase

    UniProtKB/TrEMBL
    A0A151MCS3
    Related
    ENSAMIP00015022515.1, ENSAMIT00015031721.1
    Conserved Domains (1) summary
    PTZ00333
    Location:1 → 246
    PTZ00333; triosephosphate isomerase; Provisional
Nucleotide Protein
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Gene LinkOut

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