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PGAP2 post-GPI attachment to proteins 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568979, updated on 6-Jun-2024

Summary

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Gene symbol
PGAP2
Gene description
post-GPI attachment to proteins 2
Locus tag
Y1Q_0012776
See related
EnsemblRapid:ENSAMIG00015023516
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
PGAP2-1
Orthologs
human mouse all
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Genomic context

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See PGAP2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (481362318..481382055)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714248.1 (159338..178367)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene cholinergic receptor nicotinic alpha 10 subunit Neighboring gene nucleoporin 98 and 96 precursor Neighboring gene ras homolog family member G Neighboring gene stromal interaction molecule 1 Neighboring gene uncharacterized LOC132249049 Neighboring gene uncharacterized LOC109281319

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
post-GPI attachment to proteins factor 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    481362318..481382055
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059723454.1 → XP_059579437.1  post-GPI attachment to proteins factor 2 isoform X2

    UniProtKB/TrEMBL
    A0A151M1D3

  2. XM_059723453.1 → XP_059579436.1  post-GPI attachment to proteins factor 2 isoform X1

    UniProtKB/TrEMBL
    A0A151M1A8
    Related
    ENSAMIP00015032207.1, ENSAMIT00015044602.1

  3. XM_059723455.1 → XP_059579438.1  post-GPI attachment to proteins factor 2 isoform X3

    UniProtKB/TrEMBL
    A0A151M1A8

  4. XM_019480165.2 → XP_019335710.1  post-GPI attachment to proteins factor 2 isoform X1

    UniProtKB/TrEMBL
    A0A151M1A8

  5. XM_019480166.2 → XP_019335711.1  post-GPI attachment to proteins factor 2 isoform X3

    UniProtKB/TrEMBL
    A0A151M1A8
Nucleotide Protein
Heading Accession and Version

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