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CPO carboxypeptidase O [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568645, updated on 10-Mar-2024

Summary

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Gene symbol
CPO
Gene description
carboxypeptidase O
Locus tag
Y1Q_0008650
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See CPO in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (174731880..174743846)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711096.1 (4527202..4539141)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene malate dehydrogenase 1B Neighboring gene FAST kinase domains 2 Neighboring gene KLF transcription factor 7 Neighboring gene cAMP responsive element binding protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metallocarboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: carboxypeptidase O

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    174731880..174743846
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006273785.4 → XP_006273847.4  LOW QUALITY PROTEIN: carboxypeptidase O

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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