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GCSH glycine cleavage system protein H [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568593, updated on 8-May-2024

Summary

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Gene symbol
GCSH
Gene description
glycine cleavage system protein H
Locus tag
Y1Q_0010312
See related
EnsemblRapid:ENSAMIG00015001553
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
GCSH-1
Orthologs
human mouse all
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Genomic context

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See GCSH in Genome Data Viewer
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 10 NC_081833.1 (69995871..70005765, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709980.1 (4423460..4433370, complement)

Chromosome 10 - NC_081833.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 3E-like Neighboring gene U1 spliceosomal RNA Neighboring gene polycystin-1-like protein 2 Neighboring gene beta-carotene oxygenase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in glycine decarboxylation via glycine cleavage system IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein lipoylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycine cleavage complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine cleavage system H protein, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081833.1 Reference rAllMis1 Primary Assembly

    Range
    69995871..70005765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019488216.1 → XP_019343761.1  glycine cleavage system H protein, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A151NM49
    Related
    ENSAMIP00015001750.1, ENSAMIT00015002572.1

  2. XM_014609282.3 → XP_014464768.1  glycine cleavage system H protein, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A151NM38
    Conserved Domains (1) summary
    PRK01202
    Location:8 → 127
    PRK01202; glycine cleavage system protein H; Provisional
Nucleotide Protein
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