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SOAT1 sterol O-acyltransferase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568578, updated on 8-May-2024

Summary

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Gene symbol
SOAT1
Gene description
sterol O-acyltransferase 1
Locus tag
Y1Q_0004319
See related
EnsemblRapid:ENSAMIG00015022971
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (51266249..51303182)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713513.1 (10145436..10183092, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene torsin family 3 member A Neighboring gene ABL proto-oncogene 2, non-receptor tyrosine kinase Neighboring gene axonemal dynein light chain domain containing 1 Neighboring gene NPHS2 stomatin family member, podocin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cholesterol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cholesterol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cholesterol efflux IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cholesterol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sterol O-acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    51266249..51303182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019500248.2 → XP_019355793.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A151MII4
    Related
    ENSAMIP00015031668.1, ENSAMIT00015043601.1

  2. XM_019500250.2 → XP_019355795.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A151MII4
    Related
    ENSAMIP00015031653.1, ENSAMIT00015043581.1

  3. XM_019500249.2 → XP_019355794.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A151MII4

  4. XM_019500251.2 → XP_019355796.1  sterol O-acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A151MII4

  5. XM_019500252.2 → XP_019355797.1  sterol O-acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A151MII4
    Related
    ENSAMIP00015031677.1, ENSAMIT00015043619.1
Nucleotide Protein
Heading Accession and Version

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