U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

B3GALT1 beta-1,3-galactosyltransferase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102568197, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
B3GALT1
Gene description
beta-1,3-galactosyltransferase 1
Locus tag
Y1Q_0011547
See related
EnsemblRapid:ENSAMIG00015025367
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See B3GALT1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (215226035..215629434, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714267.1 (12332655..12652302, complement)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene ceramide synthase 6 Neighboring gene serine/threonine kinase 39 Neighboring gene uncharacterized LOC132250401 Neighboring gene uncharacterized LOC132250400 Neighboring gene U5 spliceosomal RNA Neighboring gene xin actin binding repeat containing 2 Neighboring gene sodium channel protein type 2 subunit alpha

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
beta-1,3-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    215226035..215629434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727312.1 → XP_059583295.1  beta-1,3-galactosyltransferase 1

    Related
    ENSAMIP00015034949.1, ENSAMIT00015048048.1

  2. XM_059727311.1 → XP_059583294.1  beta-1,3-galactosyltransferase 1

    Related
    ENSAMIP00015034948.1, ENSAMIT00015048047.1

  3. XM_059727313.1 → XP_059583296.1  beta-1,3-galactosyltransferase 1

  4. XM_059727315.1 → XP_059583298.1  beta-1,3-galactosyltransferase 1

  5. XM_059727314.1 → XP_059583297.1  beta-1,3-galactosyltransferase 1

RNA

  1. XR_009462108.1 RNA Sequence

  2. XR_009462109.1 RNA Sequence

  3. XR_009462110.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.