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DPY19L4 dpy-19 like 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102567950, updated on 8-May-2024

Summary

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Gene symbol
DPY19L4
Gene description
dpy-19 like 4
Locus tag
Y1Q_0018041
See related
EnsemblRapid:ENSAMIG00015005727
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
DPY19L3L
Orthologs
human mouse all
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Genomic context

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See DPY19L4 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (43214870..43280750, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017712118.1 (22545177..22605481, complement)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene cyclin E2 Neighboring gene integrator complex subunit 8 Neighboring gene neural-cadherin Neighboring gene uncharacterized LOC109285198 Neighboring gene FRAT regulator of WNT signaling pathway 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear inner membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable C-mannosyltransferase DPY19L4
Names
putative C-mannosyltransferase DPY19L3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    43214870..43280750 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006273944.4 → XP_006274006.2  probable C-mannosyltransferase DPY19L4 isoform X1

    UniProtKB/TrEMBL
    A0A151MXZ3
    Related
    ENSAMIP00015006964.1, ENSAMIT00015010315.1
    Conserved Domains (1) summary
    pfam10034
    Location:59 → 711
    Dpy19; Q-cell neuroblast polarization

  2. XM_019495755.2 → XP_019351300.1  probable C-mannosyltransferase DPY19L4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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