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ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102566918, updated on 8-May-2024

Summary

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Gene symbol
ST8SIA6
Gene description
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
Locus tag
Y1Q_0019090
See related
EnsemblRapid:ENSAMIG00015011932
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See ST8SIA6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (181384578..181467763, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017712875.1 (643859..725266)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene tRNA aspartic acid methyltransferase 1 Neighboring gene vimentin Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene signal transducing adaptor molecule

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-2,8-sialyltransferase 8F

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    181384578..181467763 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059729051.1 → XP_059585034.1  alpha-2,8-sialyltransferase 8F isoform X2

  2. XM_019498066.2 → XP_019353611.2  alpha-2,8-sialyltransferase 8F isoform X1

    Related
    ENSAMIP00015015336.1, ENSAMIT00015021948.1

  3. XM_019498065.2 → XP_019353610.2  alpha-2,8-sialyltransferase 8F isoform X1

  4. XM_019498068.2 → XP_019353613.2  alpha-2,8-sialyltransferase 8F isoform X1

  5. XM_019498067.2 → XP_019353612.2  alpha-2,8-sialyltransferase 8F isoform X1

RNA

  1. XR_002093709.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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