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PPP1R3A protein phosphatase 1 regulatory subunit 3A [ Alligator mississippiensis (American alligator) ]

Gene ID: 102566877, updated on 8-May-2024

Summary

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Gene symbol
PPP1R3A
Gene description
protein phosphatase 1 regulatory subunit 3A
Locus tag
Y1Q_0019708
See related
EnsemblRapid:ENSAMIG00015020321
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PPP1R3A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 4 NC_081827.1 (51713810..51759287)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707830.1 (16559438..16610021)

Chromosome 4 - NC_081827.1Genomic Context describing neighboring genes Neighboring gene forkhead box P2 Neighboring gene ribonuclease H-like Neighboring gene uncharacterized LOC132249819 Neighboring gene small integral membrane protein 30 Neighboring gene G protein-coupled receptor 85

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein phosphatase 1 binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of glycogen biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of protein phosphatase type 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein phosphatase 1 regulatory subunit 3A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081827.1 Reference rAllMis1 Primary Assembly

    Range
    51713810..51759287
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006273940.4 → XP_006274002.3  protein phosphatase 1 regulatory subunit 3A

    Related
    ENSAMIP00015027998.1, ENSAMIT00015038643.1
Nucleotide Protein
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