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KPTN kaptin, actin binding protein [ Alligator mississippiensis (American alligator) ]

Gene ID: 102564972, updated on 8-May-2024

Summary

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Gene symbol
KPTN
Gene description
kaptin, actin binding protein
Locus tag
Y1Q_0020722
See related
EnsemblRapid:ENSAMIG00015005939
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
kaptin
Orthologs
human mouse all
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Genomic context

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See KPTN in Genome Data Viewer
Location:
chromosome: 15
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 15 NC_081838.1 (1814570..1820115)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017708552.1 (185983..191623)

Chromosome 15 - NC_081838.1Genomic Context describing neighboring genes Neighboring gene E3 SUMO-protein ligase ZBED1 Neighboring gene NSF attachment protein alpha Neighboring gene solute carrier family 8 member A2 Neighboring gene Meis homeobox 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081838.1 Reference rAllMis1 Primary Assembly

    Range
    1814570..1820115
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019483002.2 → XP_019338547.1  KICSTOR complex protein kaptin isoform X1

  2. XM_006264980.4 → XP_006265042.1  KICSTOR complex protein kaptin isoform X2

    UniProtKB/TrEMBL
    A0A151P3V4
    Related
    ENSAMIP00015007298.1, ENSAMIT00015010723.1
Nucleotide Protein
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