U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LPCAT4 lysophosphatidylcholine acyltransferase 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102563556, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
LPCAT4
Gene description
lysophosphatidylcholine acyltransferase 4
Locus tag
Y1Q_0014080
See related
EnsemblRapid:ENSAMIG00015016158
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LPCAT4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 7 NC_081830.1 (36356379..36377074)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713417.1 (538620..572645)

Chromosome 7 - NC_081830.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102563314 Neighboring gene olfactory receptor 734-like Neighboring gene NUT family member 1 Neighboring gene NOP10 ribonucleoprotein

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-acylglycerophosphocholine O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
lysophospholipid acyltransferase LPCAT4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081830.1 Reference rAllMis1 Primary Assembly

    Range
    36356379..36377074
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059730804.1 → XP_059586787.1  lysophospholipid acyltransferase LPCAT4 isoform X1

    Related
    ENSAMIP00015021468.1, ENSAMIT00015030468.1

  2. XM_059730805.1 → XP_059586788.1  lysophospholipid acyltransferase LPCAT4 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.