U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GALK1 galactokinase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102562576, updated on 8-May-2024

Summary

Go to the top of the page Help
Gene symbol
GALK1
Gene description
galactokinase 1
Locus tag
Y1Q_0016502
See related
EnsemblRapid:ENSAMIG00015019738
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See GALK1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 8 NC_081831.1 (13043440..13051105, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711527.1 (10764066..10771698, complement)

Chromosome 8 - NC_081831.1Genomic Context describing neighboring genes Neighboring gene SAP30 binding protein Neighboring gene integrin subunit beta 4 Neighboring gene uncharacterized LOC102570496 Neighboring gene histone H3.3A

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables galactokinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in galactose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galactokinase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081831.1 Reference rAllMis1 Primary Assembly

    Range
    13043440..13051105 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006269243.4 → XP_006269305.1  galactokinase

    UniProtKB/TrEMBL
    A0A151N314
    Related
    ENSAMIP00015027038.1, ENSAMIT00015037464.1
    Conserved Domains (4) summary
    PRK05101
    Location:19 → 388
    PRK05101; galactokinase; Provisional
    pfam00288
    Location:129 → 195
    GHMP_kinases_N; GHMP kinases N terminal domain
    pfam08544
    Location:296 → 372
    GHMP_kinases_C; GHMP kinases C terminal
    pfam10509
    Location:18 → 68
    GalKase_gal_bdg; Galactokinase galactose-binding signature
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.