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LPCAT1 lysophosphatidylcholine acyltransferase 1 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561877, updated on 8-May-2024

Summary

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Gene symbol
LPCAT1
Gene description
lysophosphatidylcholine acyltransferase 1
Locus tag
Y1Q_0015436
See related
EnsemblRapid:ENSAMIG00015001680
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See LPCAT1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 3 NC_081826.1 (140231111..140298516, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710778.1 (5953140..6022199)

Chromosome 3 - NC_081826.1Genomic Context describing neighboring genes Neighboring gene telomerase reverse transcriptase Neighboring gene CLPTM1 like Neighboring gene uncharacterized LOC109284027 Neighboring gene uncharacterized LOC132249104

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lysophosphatidylcholine acyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081826.1 Reference rAllMis1 Primary Assembly

    Range
    140231111..140298516 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019491102.2 → XP_019346647.1  lysophosphatidylcholine acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NDN2

  2. XM_019491101.2 → XP_019346646.1  lysophosphatidylcholine acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NDN2

  3. XM_006272896.4 → XP_006272958.2  lysophosphatidylcholine acyltransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A151NDN2
    Related
    ENSAMIP00015002007.1, ENSAMIT00015002842.1

  4. XM_019491103.2 → XP_019346648.1  lysophosphatidylcholine acyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A151NDN2
    Related
    ENSAMIP00015002006.1, ENSAMIT00015002841.1
Nucleotide Protein
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