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GAD2 glutamate decarboxylase 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561701, updated on 18-Sep-2024

Summary

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Gene symbol
GAD2
Gene description
glutamate decarboxylase 2
Locus tag
Y1Q_0014415
See related
EnsemblRapid:ENSAMIG00015009469
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See GAD2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (188882906..188936154)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017707901.1 (6391422..6442991)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene G protein-coupled receptor 158 Neighboring gene myosin IIIA Neighboring gene uncharacterized LOC109285676 Neighboring gene uncharacterized LOC109285808

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. GAD(65) and GAD(67) isoforms of the glutamic acid decarboxylase gene originated before the divergence of cartilaginous fishes. Lariviere K, et al. Mol Biol Evol, 2002 Dec. PMID 12446824

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glutamate decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in gamma-aminobutyrate shunt IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glutamate decarboxylase 2
Names
glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    188882906..188936154
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006265292.3 → XP_006265354.1  glutamate decarboxylase 2 isoform X1

    UniProtKB/TrEMBL
    A0A151PD09
    Related
    ENSAMIP00015011708.1, ENSAMIT00015017077.1
    Conserved Domains (1) summary
    pfam00282
    Location:138 → 509
    Pyridoxal_deC; Pyridoxal-dependent decarboxylase conserved domain

  2. XM_019497924.2 → XP_019353469.1  glutamate decarboxylase 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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