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PIGW phosphatidylinositol glycan anchor biosynthesis class W [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561436, updated on 8-May-2024

Summary

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Gene symbol
PIGW
Gene description
phosphatidylinositol glycan anchor biosynthesis class W
See related
EnsemblRapid:ENSAMIG00015001485
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PIGW in Genome Data Viewer
Location:
chromosome: 14
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 14 NC_081837.1 (4936992..4946455)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017711418.1 (12478385..12491543, complement)

Chromosome 14 - NC_081837.1Genomic Context describing neighboring genes Neighboring gene zinc finger HIT-type containing 3 Neighboring gene uncharacterized LOC109284586 Neighboring gene myosin XIX Neighboring gene gametogenetin binding protein 2 Neighboring gene dehydrogenase/reductase 11

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucosaminyl-phosphatidylinositol O-acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein localization to plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-glycan biosynthesis class W protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081837.1 Reference rAllMis1 Primary Assembly

    Range
    4936992..4946455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019493373.2 → XP_019348918.1  phosphatidylinositol-glycan biosynthesis class W protein

    Related
    ENSAMIP00015001659.1, ENSAMIT00015002449.1

  2. XM_019493372.2 → XP_019348917.1  phosphatidylinositol-glycan biosynthesis class W protein

  3. XM_019493374.2 → XP_019348919.1  phosphatidylinositol-glycan biosynthesis class W protein

  4. XM_019493371.2 → XP_019348916.1  phosphatidylinositol-glycan biosynthesis class W protein

    Related
    ENSAMIP00015001652.1, ENSAMIT00015002442.1
Nucleotide Protein
Heading Accession and Version

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