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LGALS3 galectin 3 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102561130, updated on 8-May-2024

Summary

Gene symbol
LGALS3
Gene description
galectin 3
Locus tag
Y1Q_0014787
See related
EnsemblRapid:ENSAMIG00015009026
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Also known as
galectin-3
Orthologs
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Genomic context

See LGALS3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (293164654..293183398)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017714221.1 (3578323..3597152, complement)

Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene ras homolog family member J Neighboring gene potassium voltage-gated channel subfamily H member 5 Neighboring gene small Cajal body-specific RNA 14 Neighboring gene DLG associated protein 5 Neighboring gene F-box protein 34

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables IgE binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables laminin binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in eosinophil chemotaxis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in macrophage chemotaxis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in monocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of endocytosis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in negative regulation of extrinsic apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in neutrophil chemotaxis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive chemotaxis IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in positive regulation of calcium ion import IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in immunological synapse IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081825.1 Reference rAllMis1 Primary Assembly

    Range
    293164654..293183398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014598840.3XP_014454326.2  galectin-3

    Related
    ENSAMIP00015010921.1, ENSAMIT00015016176.1