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FUT9 fucosyltransferase 9 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102560865, updated on 8-May-2024

Summary

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Gene symbol
FUT9
Gene description
fucosyltransferase 9
Locus tag
Y1Q_0006598
See related
EnsemblRapid:ENSAMIG00015000916
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See FUT9 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (82368501..82376453)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017709512.1 (6309187..6444700, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene mannosidase endo-alpha Neighboring gene uncharacterized LOC132252094 Neighboring gene UFM1 specific ligase 1 Neighboring gene four and a half LIM domains 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Names
alpha-(1,3)-fucosyltransferase 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    82368501..82376453
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059732140.1 → XP_059588123.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    Related
    ENSAMIP00015000782.1, ENSAMIT00015001338.1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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