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PLCB4 phospholipase C beta 4 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102560430, updated on 6-Jun-2024

Summary

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Gene symbol
PLCB4
Gene description
phospholipase C beta 4
Locus tag
Y1Q_0002373
See related
EnsemblRapid:ENSAMIG00015020367
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See PLCB4 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
42
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 1 NC_081824.1 (223674509..224028230, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017713592.1 (18453085..18807143, complement)

Chromosome 1 - NC_081824.1Genomic Context describing neighboring genes Neighboring gene p21 (RAC1) activated kinase 5 Neighboring gene lysosomal associated membrane protein family member 5 Neighboring gene uncharacterized LOC132247552 Neighboring gene phospholipase C beta 1 Neighboring gene thioredoxin related transmembrane protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol phospholipase C activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081824.1 Reference rAllMis1 Primary Assembly

    Range
    223674509..224028230 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019500820.2 → XP_019356365.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X2

    UniProtKB/TrEMBL
    A0A151MGW1
    Related
    ENSAMIP00015028086.1, ENSAMIT00015038732.1

  2. XM_019500821.2 → XP_019356366.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X3

    UniProtKB/TrEMBL
    A0A151MGW1
    Related
    ENSAMIP00015028100.1, ENSAMIT00015038746.1

  3. XM_059720203.1 → XP_059576186.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A151MGW1

  4. XM_019500818.2 → XP_019356363.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A151MGW1
    Related
    ENSAMIP00015028093.1, ENSAMIT00015038739.1

  5. XM_019500819.2 → XP_019356364.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A151MGW1

  6. XM_019500817.2 → XP_019356362.1  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1

    UniProtKB/TrEMBL
    A0A151MGW1
Nucleotide Protein
Heading Accession and Version

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