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B4GALT2 beta-1,4-galactosyltransferase 2 [ Alligator mississippiensis (American alligator) ]

Gene ID: 102558168, updated on 8-May-2024

Summary

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Gene symbol
B4GALT2
Gene description
beta-1,4-galactosyltransferase 2
Locus tag
Y1Q_0019024
See related
EnsemblRapid:ENSAMIG00015019580
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See B4GALT2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 5 NC_081828.1 (1398114..1405182)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017710723.1 (6602..12760, complement)

Chromosome 5 - NC_081828.1Genomic Context describing neighboring genes Neighboring gene diphthamide biosynthesis 2 Neighboring gene ATPase H+ transporting V0 subunit b Neighboring gene coiled-coil domain containing 24 Neighboring gene solute carrier family 6 member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081828.1 Reference rAllMis1 Primary Assembly

    Range
    1398114..1405182
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059727718.1 → XP_059583701.1  beta-1,4-galactosyltransferase 2 isoform X1

    Related
    ENSAMIP00015026764.1, ENSAMIT00015037169.1

  2. XM_059727719.1 → XP_059583702.1  beta-1,4-galactosyltransferase 2 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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