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GANC glucosidase alpha, neutral C [ Alligator mississippiensis (American alligator) ]

Gene ID: 102557766, updated on 8-May-2024

Summary

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Gene symbol
GANC
Gene description
glucosidase alpha, neutral C
Locus tag
Y1Q_0016005
See related
EnsemblRapid:ENSAMIG00015010056
Gene type
protein coding
RefSeq status
MODEL
Organism
Alligator mississippiensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Crocodylia; Alligatoridae; Alligatorinae; Alligator
Orthologs
human mouse all
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Genomic context

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See GANC in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_09 current rAllMis1 (GCF_030867095.1) 2 NC_081825.1 (237687430..237731986, complement)
102 previous assembly ASM28112v4 (GCF_000281125.3) Unplaced Scaffold NW_017712338.1 (7868176..7912970)

Chromosome 2 - NC_081825.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 106 Neighboring gene calpain 3 Neighboring gene transmembrane protein 87A Neighboring gene VPS39 subunit of HOPS complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral alpha-glucosidase C
Names
glucosidase, alpha

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030867095.1-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference rAllMis1 Primary Assembly

Genomic

  1. NC_081825.1 Reference rAllMis1 Primary Assembly

    Range
    237687430..237731986 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014595516.3 → XP_014451002.1  neutral alpha-glucosidase C isoform X1

    UniProtKB/TrEMBL
    A0A151MVF0
    Related
    ENSAMIP00015012514.1, ENSAMIT00015018259.1
    Conserved Domains (4) summary
    cd06603
    Location:354 → 821
    GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
    cd14752
    Location:214 → 354
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam01055
    Location:335 → 780
    Glyco_hydro_31; Glycosyl hydrolases family 31
    cl11507
    Location:63 → 137
    DUF1471; Protein of unknown function (DUF1471)

  2. XM_019496565.2 → XP_019352110.1  neutral alpha-glucosidase C isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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