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LOC102556249 uncharacterized LOC102556249 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102556249, updated on 17-Aug-2024

Summary

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Symbol
LOC102556249provided by RGD
Full Name
uncharacterized LOC102556249provided by RGD
Primary source
RGD:7749529
See related
AllianceGenome:RGD:7749529
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Brain (RPKM 30.8), Testes (RPKM 17.6) and 6 other tissues See more
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Genomic context

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See LOC102556249 in Genome Data Viewer
Location:
14p22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (1521693..1530686, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (1376707..1385688, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (2382141..2391141, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ATP synthase membrane subunit e Neighboring gene phosphodiesterase 6B Neighboring gene uncharacterized LOC134481810 Neighboring gene transmembrane protein 271 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

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GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    1521693..1530686 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_010057643.1 RNA Sequence

  2. XR_005493072.2 RNA Sequence

  3. XR_005493064.2 RNA Sequence

  4. XR_005493070.2 RNA Sequence

  5. XR_005493067.2 RNA Sequence

  6. XR_005493059.2 RNA Sequence

  7. XR_010057642.1 RNA Sequence

  8. XR_010057640.1 RNA Sequence

  9. XR_010057639.1 RNA Sequence

  10. XR_010057645.1 RNA Sequence

  11. XR_010057644.1 RNA Sequence

  12. XR_010057641.1 RNA Sequence

  13. XR_010057647.1 RNA Sequence

  14. XR_010057646.1 RNA Sequence

  15. XR_005493068.2 RNA Sequence

  16. XR_005493065.2 RNA Sequence

  17. XR_005493069.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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