U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC102550950 uncharacterized LOC102550950 [ Rattus norvegicus (Norway rat) ]

Gene ID: 102550950, updated on 17-Aug-2024

Summary

Symbol
LOC102550950provided by RGD
Full Name
uncharacterized LOC102550950provided by RGD
Primary source
RGD:7693155
See related
EnsemblRapid:ENSRNOG00000063110 AllianceGenome:RGD:7693155
Gene type
ncRNA
RefSeq status
MODEL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Kidney (RPKM 7.2), Liver (RPKM 2.5) and 7 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC102550950 in Genome Data Viewer
Location:
14p22
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 14 NC_086032.1 (9416105..9433993, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 14 NC_051349.1 (9111787..9129680, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 14 NC_005113.4 (10752075..10769973, complement)

Chromosome 14 - NC_086032.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2 variant 2-like Neighboring gene placenta associated 8 Neighboring gene COP9 signalosome subunit 4 Neighboring gene lin-54 DREAM MuvB core complex component Neighboring gene SEC31 homolog A, COPII coat complex component

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086032.1 Reference GRCr8

    Range
    9416105..9433993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005493146.2 RNA Sequence

    Related
    ENSRNOT00000108667.2
  2. XR_595723.4 RNA Sequence

    Related
    ENSRNOT00000111445.2
  3. XR_010057448.1 RNA Sequence