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CHST11 carbohydrate sulfotransferase 11 [ Vicugna pacos (alpaca) ]

Gene ID: 102544775, updated on 10-Mar-2024

Summary

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Gene symbol
CHST11
Gene description
carbohydrate sulfotransferase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See CHST11 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
4
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 12 Unlocalized Scaffold NW_021964178.1 (19857409..20106906, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882757.1 (7403380..7653518, complement)

NW_021964178.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 41 member 2 Neighboring gene uncharacterized LOC116282589 Neighboring gene uncharacterized LOC116282652 Neighboring gene thioredoxin reductase 1 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene EP300 interacting inhibitor of differentiation 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964178.1 Reference VicPac3.1 Primary Assembly

    Range
    19857409..20106906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031683175.1 → XP_031539035.1  carbohydrate sulfotransferase 11 isoform X2

    UniProtKB/TrEMBL
    A0A6J3AWP7
    Conserved Domains (1) summary
    pfam03567
    Location:118 → 348
    Sulfotransfer_2; Sulfotransferase family

  2. XM_031683174.1 → XP_031539034.1  carbohydrate sulfotransferase 11 isoform X1

    UniProtKB/TrEMBL
    A0A6J3AYV8
    Conserved Domains (1) summary
    pfam03567
    Location:123 → 353
    Sulfotransfer_2; Sulfotransferase family

  3. XM_006205879.3 → XP_006205941.1  carbohydrate sulfotransferase 11 isoform X3

    UniProtKB/TrEMBL
    A0A6I9I9C7
    Conserved Domains (1) summary
    pfam03567
    Location:113 → 343
    Sulfotransfer_2; Sulfotransferase family

  4. XM_006205880.3 → XP_006205942.1  carbohydrate sulfotransferase 11 isoform X4

    UniProtKB/TrEMBL
    A0A6I9IAY1
    Conserved Domains (1) summary
    pfam03567
    Location:108 → 338
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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