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DHDH dihydrodiol dehydrogenase [ Vicugna pacos (alpaca) ]

Gene ID: 102544148, updated on 10-Mar-2024

Summary

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Gene symbol
DHDH
Gene description
dihydrodiol dehydrogenase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See DHDH in Genome Data Viewer
Location:
chromosome: 11
Exon count:
7
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 11 Unlocalized Scaffold NW_021964174.1 (7173131..7180858)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882787.1 (3236144..3243867, complement)

NW_021964174.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 15A Neighboring gene TUB like protein 2 Neighboring gene nucleobindin 1 Neighboring gene uncharacterized LOC116282266 Neighboring gene BCL2 associated X, apoptosis regulator Neighboring gene ferritin light chain Neighboring gene glycogen synthase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-xylose 1-dehydrogenase (NADP+) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in D-xylose catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
trans-1,2-dihydrobenzene-1,2-diol dehydrogenase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964174.1 Reference VicPac3.1 Primary Assembly

    Range
    7173131..7180858
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006208486.3 → XP_006208548.1  trans-1,2-dihydrobenzene-1,2-diol dehydrogenase

    UniProtKB/TrEMBL
    A0A6I9IBI7
    Conserved Domains (1) summary
    COG0673
    Location:1 → 327
    MviM; Predicted dehydrogenase [General function prediction only]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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