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SRD5A1 steroid 5 alpha-reductase 1 [ Vicugna pacos (alpaca) ]

Gene ID: 102542101, updated on 10-Mar-2024

Summary

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Gene symbol
SRD5A1
Gene description
steroid 5 alpha-reductase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See SRD5A1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 3 Unlocalized Scaffold NW_021964160.1 (61177729..61190654, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882712.1 (4556643..4577545)

NW_021964160.1Genomic Context describing neighboring genes Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene terminal nucleotidyltransferase 4A Neighboring gene transfer RNA serine (anticodon GGA) Neighboring gene NOP2/Sun RNA methyltransferase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxo-5-alpha-steroid 4-dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in steroid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
3-oxo-5-alpha-steroid 4-dehydrogenase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964160.1 Reference VicPac3.1 Primary Assembly

    Range
    61177729..61190654 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031676895.1 → XP_031532755.1  3-oxo-5-alpha-steroid 4-dehydrogenase 1

    UniProtKB/TrEMBL
    A0A6J3AEC1
    Conserved Domains (1) summary
    pfam02544
    Location:37 → 186
    Steroid_dh; 3-oxo-5-alpha-steroid 4-dehydrogenase
Nucleotide Protein
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