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SELENOI selenoprotein I [ Vicugna pacos (alpaca) ]

Gene ID: 102540590, updated on 10-Mar-2024

Summary

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Gene symbol
SELENOI
Gene description
selenoprotein I
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Also known as
EPT1
Orthologs
human mouse all
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Genomic context

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See SELENOI in Genome Data Viewer
Location:
chromosome: 15
Exon count:
10
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 15 Unlocalized Scaffold NW_021964185.1 (18011691..18046022)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882705.1 (16239923..16274192)

NW_021964185.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha Neighboring gene hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta Neighboring gene adhesion G protein-coupled receptor F3 Neighboring gene dynein regulatory complex subunit 1 Neighboring gene otoferlin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ethanolaminephosphotransferase 1
Names
ethanolaminephosphotransferase 1 (CDP-ethanolamine-specific)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964185.1 Reference VicPac3.1 Primary Assembly

    Range
    18011691..18046022
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006197182.3 → XP_006197244.3  ethanolaminephosphotransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A6I9HW41
    Conserved Domains (1) summary
    cl00453
    Location:6 → 321
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  2. XM_015242216.2 → XP_015097702.1  ethanolaminephosphotransferase 1 isoform X1

    UniProtKB/TrEMBL
    A0A6J0AN27
    Conserved Domains (1) summary
    cl00453
    Location:6 → 321
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase

  3. XM_031684871.1 → XP_031540731.1  ethanolaminephosphotransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A6J3B7R3

  4. XM_031684872.1 → XP_031540732.1  ethanolaminephosphotransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A6J3B635
    Conserved Domains (1) summary
    cl00453
    Location:6 → 182
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase
Nucleotide Protein
Heading Accession and Version

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