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PNPLA7 patatin like phospholipase domain containing 7 [ Vicugna pacos (alpaca) ]

Gene ID: 102540307, updated on 10-Mar-2024

Summary

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Gene symbol
PNPLA7
Gene description
patatin like phospholipase domain containing 7
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See PNPLA7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
37
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 4 Unlocalized Scaffold NW_021964162.1 (295982..352312, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005883045.1 (402792..459807)

NW_021964162.1Genomic Context describing neighboring genes Neighboring gene ectonucleoside triphosphate diphosphohydrolase 8 Neighboring gene NMDA receptor synaptonuclear signaling and neuronal migration factor Neighboring gene mitochondrial ribosomal protein L41 Neighboring gene diphthamide biosynthesis 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lysophospholipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964162.1 Reference VicPac3.1 Primary Assembly

    Range
    295982..352312 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031677101.1 → XP_031532961.1  patatin-like phospholipase domain-containing protein 7 isoform X8

    UniProtKB/TrEMBL
    A0A6J3AJY8
    Conserved Domains (3) summary
    cd07225
    Location:938 → 1243
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:609 → 717
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  2. XM_031677097.1 → XP_031532957.1  patatin-like phospholipase domain-containing protein 7 isoform X5

    UniProtKB/TrEMBL
    A0A6J3AIC6
    Conserved Domains (3) summary
    cd07225
    Location:925 → 1230
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:170 → 291
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  3. XM_031677099.1 → XP_031532959.1  patatin-like phospholipase domain-containing protein 7 isoform X6

    UniProtKB/TrEMBL
    A0A6J3AGR9
    Conserved Domains (3) summary
    cd07225
    Location:895 → 1200
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:566 → 674
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  4. XM_031677096.1 → XP_031532956.1  patatin-like phospholipase domain-containing protein 7 isoform X2

    UniProtKB/TrEMBL
    A0A6J3AJY1
    Conserved Domains (3) summary
    cd07225
    Location:937 → 1242
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:608 → 716
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  5. XM_031677095.1 → XP_031532955.1  patatin-like phospholipase domain-containing protein 7 isoform X1

    UniProtKB/TrEMBL
    A0A6J3AEW0
    Conserved Domains (3) summary
    cd07225
    Location:938 → 1243
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:609 → 717
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  6. XM_006218236.3 → XP_006218298.1  patatin-like phospholipase domain-containing protein 7 isoform X4

    UniProtKB/TrEMBL
    A0A6I9IQ95
    Conserved Domains (3) summary
    cd07225
    Location:937 → 1242
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:608 → 716
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  7. XM_015251140.2 → XP_015106626.1  patatin-like phospholipase domain-containing protein 7 isoform X3

    UniProtKB/TrEMBL
    A0A6J0AZU2
    Conserved Domains (3) summary
    cd07225
    Location:938 → 1243
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:609 → 717
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  8. XM_031677102.1 → XP_031532962.1  patatin-like phospholipase domain-containing protein 7 isoform X9

    UniProtKB/TrEMBL
    A0A6J3AID0
    Conserved Domains (2) summary
    cd07225
    Location:753 → 1058
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd00038
    Location:424 → 532
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...

  9. XM_031677100.1 → XP_031532960.1  patatin-like phospholipase domain-containing protein 7 isoform X7

    UniProtKB/TrEMBL
    A0A6J3AEW6
    Conserved Domains (3) summary
    cd07225
    Location:938 → 1243
    Pat_PNPLA6_PNPLA7; Patatin-like phospholipase domain containing protein 6 and protein 7
    cd12087
    Location:29 → 66
    TM_EGFR-like; Transmembrane domain of the Epidermal Growth Factor Receptor family of Protein Tyrosine Kinases
    cd00038
    Location:609 → 717
    CAP_ED; effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO ...
Nucleotide Protein
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