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FH fumarate hydratase [ Vicugna pacos (alpaca) ]

Gene ID: 102539863, updated on 11-Apr-2024

Summary

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Gene symbol
FH
Gene description
fumarate hydratase
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 23
Exon count:
11
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 23 Unlocalized Scaffold NW_021964204.1 (7896530..7927842, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882715.1 (8058957..8090341, complement)

NW_021964204.1Genomic Context describing neighboring genes Neighboring gene gremlin 2, DAN family BMP antagonist Neighboring gene regulator of G protein signaling 7 Neighboring gene kynurenine 3-monooxygenase Neighboring gene opsin 3 Neighboring gene CHM like Rab escort protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fumarate hydratase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fumarate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in malate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of tricarboxylic acid cycle heteromeric enzyme complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fumarate hydratase, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964204.1 Reference VicPac3.1 Primary Assembly

    Range
    7896530..7927842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015234781.2 → XP_015090267.1  fumarate hydratase, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6J0AAA2
    Conserved Domains (1) summary
    PRK00485
    Location:42 → 503
    fumC; fumarate hydratase; Reviewed

  2. XM_006198795.3 → XP_006198857.1  fumarate hydratase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6I9I090
    Conserved Domains (1) summary
    PRK00485
    Location:49 → 510
    fumC; fumarate hydratase; Reviewed
Nucleotide Protein
Heading Accession and Version

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