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MBL2 mannose binding lectin 2 [ Vicugna pacos (alpaca) ]

Gene ID: 102539254, updated on 10-Mar-2024

Summary

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Gene symbol
MBL2
Gene description
mannose binding lectin 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 11 Unlocalized Scaffold NW_021964176.1 (7906117..7908759, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882763.1 (864235..866877)

NW_021964176.1Genomic Context describing neighboring genes Neighboring gene dickkopf WNT signaling pathway inhibitor 1 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC116282419 Neighboring gene U4 spliceosomal RNA Neighboring gene protocadherin related 15

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of phagocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in surfactant homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in rough endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: mannose-binding protein C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964176.1 Reference VicPac3.1 Primary Assembly

    Range
    7906117..7908759 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006206677.3 → XP_006206739.3  LOW QUALITY PROTEIN: mannose-binding protein C

    UniProtKB/TrEMBL
    A0A6I9IAH0
    Conserved Domains (2) summary
    cd03591
    Location:135 → 245
    CLECT_collectin_like; C-type lectin-like domain (CTLD) of the type found in human collectins including lung surfactant proteins A and D, mannose- or mannan binding lectin (MBL), and CL-L1 (collectin liver 1)
    pfam01391
    Location:38 → 90
    Collagen; Collagen triple helix repeat (20 copies)
Nucleotide Protein
Heading Accession and Version

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