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LMAN2L lectin, mannose binding 2 like [ Vicugna pacos (alpaca) ]

Gene ID: 102538917, updated on 19-Jun-2024

Summary

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Gene symbol
LMAN2L
Gene description
lectin, mannose binding 2 like
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See LMAN2L in Genome Data Viewer
Location:
chromosome: 28
Exon count:
10
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) 28 Unlocalized Scaffold NW_021964212.1 (6871517..6894129)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882742.1 (9280654..9303339, complement)

NW_021964212.1Genomic Context describing neighboring genes Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 3 Neighboring gene cyclin and CBS domain divalent metal cation transport mediator 4 Neighboring gene transfer RNA aspartic acid (anticodon AUC) Neighboring gene fer-1 like family member 5 Neighboring gene KAT8 regulatory NSL complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
VIP36-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_021964212.1 Reference VicPac3.1 Primary Assembly

    Range
    6871517..6894129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006203868.3 → XP_006203930.1  VIP36-like protein isoform X2

    UniProtKB/TrEMBL
    A0A6I9I8B9
    Conserved Domains (1) summary
    cl14058
    Location:50 → 298
    lectin_L-type; legume lectins

  2. XM_031692028.1 → XP_031547888.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A6J3BR37
    Conserved Domains (1) summary
    cl14058
    Location:1 → 171
    lectin_L-type; legume lectins

  3. XM_031692029.1 → XP_031547889.1  VIP36-like protein isoform X4

    UniProtKB/TrEMBL
    A0A6J3BNR5
    Conserved Domains (1) summary
    cl14058
    Location:1 → 160
    lectin_L-type; legume lectins

  4. XM_006203867.3 → XP_006203929.1  VIP36-like protein isoform X1

    UniProtKB/TrEMBL
    A0A6I9I523
    Conserved Domains (1) summary
    cl14058
    Location:50 → 309
    lectin_L-type; legume lectins

  5. XM_031692027.1 → XP_031547887.1  VIP36-like protein isoform X3

    UniProtKB/TrEMBL
    A0A6J3BR37
    Conserved Domains (1) summary
    cl14058
    Location:1 → 171
    lectin_L-type; legume lectins
Nucleotide Protein
Heading Accession and Version

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