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INPP5A inositol polyphosphate-5-phosphatase A [ Vicugna pacos (alpaca) ]

Gene ID: 102536179, updated on 10-Mar-2024

Summary

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Gene symbol
INPP5A
Gene description
inositol polyphosphate-5-phosphatase A
Gene type
protein coding
RefSeq status
MODEL
Organism
Vicugna pacos
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Vicugna
Orthologs
human mouse all
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Genomic context

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See INPP5A in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
102 current VicPac3.1 (GCF_000164845.3) Unplaced Scaffold NW_022024333.1 (754251..916164, complement)
101 previous assembly Vicugna_pacos-2.0.1 (GCF_000164845.1) Unplaced Scaffold NW_005882771.1 (7518793..7680746)

NW_022024333.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116278673 Neighboring gene cilia and flagella associated protein 46 Neighboring gene atrophin-1 Neighboring gene PWWP domain containing 2B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-polyphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol polyphosphate-5-phosphatase A
Names
inositol polyphosphate-5-phosphatase, 40kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Vicugna pacos Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VicPac3.1 Primary Assembly

Genomic

  1. NW_022024333.1 Reference VicPac3.1 Primary Assembly

    Range
    754251..916164 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006207445.2 → XP_006207507.1  inositol polyphosphate-5-phosphatase A isoform X4

    UniProtKB/TrEMBL
    A0A6I9IA53
    Conserved Domains (1) summary
    cd09092
    Location:10 → 394
    INPP5A; Type I inositol polyphosphate 5-phosphatase I

  2. XM_015241898.2 → XP_015097384.1  inositol polyphosphate-5-phosphatase A isoform X2

    UniProtKB/TrEMBL
    A0A6J0AML7
    Conserved Domains (1) summary
    cd09092
    Location:10 → 435
    INPP5A; Type I inositol polyphosphate 5-phosphatase I

  3. XM_031673997.1 → XP_031529857.1  inositol polyphosphate-5-phosphatase A isoform X5

    UniProtKB/TrEMBL
    A0A6J3A9G6
    Conserved Domains (1) summary
    cd09092
    Location:1 → 355
    INPP5A; Type I inositol polyphosphate 5-phosphatase I

  4. XM_031673996.1 → XP_031529856.1  inositol polyphosphate-5-phosphatase A isoform X3

    UniProtKB/TrEMBL
    A0A6J3AAV6
    Conserved Domains (1) summary
    cd09092
    Location:72 → 426
    INPP5A; Type I inositol polyphosphate 5-phosphatase I

  5. XM_031673995.1 → XP_031529855.1  inositol polyphosphate-5-phosphatase A isoform X1

    UniProtKB/TrEMBL
    A0A6J3A6J1
    Conserved Domains (1) summary
    cd09092
    Location:72 → 467
    INPP5A; Type I inositol polyphosphate 5-phosphatase I
Nucleotide Protein
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